BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036D02LP1|AL430210
(983 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1715 1798 0.0
>3x_Contig1715
Length = 16241
Score = 1798 bits (898), Expect = 0.0
Identities = 954/976 (97%), Gaps = 5/976 (0%)
Strand = Plus / Minus
Query: 9 gatcatgatgcaagtatctcgntcgttaggatatgagaggatccttcgatcgtgttgtac 68
||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct: 10049 gatcatgatgcaagtatctcg-tcgtttggatatg-gaggatccttcgatcgtgttgtac 9992
Query: 69 atccgtatcgcttatgtcgcttctgttgccatcacttggtccatctaccaatacgctara 128
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9991 atccgtatcgcttatgtcgcttctgttgccatcacttggtccatctaccaatacgctaga 9932
Query: 129 gmtcaaatcgttaagaagaacgatttggccactttgaaatacgtggctccarctaaccca 188
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 9931 gctcaaatcgttaagaagaacgatttggccactttgaaatacgtggctccagctaaccca 9872
Query: 189 ttgggtggtcaaamcgaaaaaaaatatggaagtcactaccgttcgtgattacgatattac 248
||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 9871 ttgggtggtcaaaccgagaaaaaat-tggaagtcactaccgttcgtgattacgat-ttac 9814
Query: 249 aacagattgattctgccattaaatccatctacactrgtttggctatgatgggtttcatgc 308
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9813 aacagattgattctgccattaaatccatctacactggtttggctatgatgggtttcatgc 9754
Query: 309 atttgtacatgaaatacaccaamccattgttcatkcaaaccatctcaccaatcaagtmcg 368
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||
Sbjct: 9753 atttgtacatgaaatacaccaacccattgttcatgcaaaccatctcaccaatcaagtccg 9694
Query: 369 ctttggaamataamraagttcaaattcatttgttcggaaaaccarcttctggtgatttka 428
|||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 9693 ctttggaacataacgaagttcaaattcatttgttcggaaaaccagcttctggtgatttga 9634
Query: 429 agagacctttcaagactccatctttgttcggtggtgccggtggtgccagtgaamcaaaga 488
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9633 agagacctttcaagactccatctttgttcggtggtgccggtggtgccagtgaaccaaaga 9574
Query: 489 ctgamaagaaatctatcgaaactgctgaaaaggctggtaacggtggtgtcaaagctgaat 548
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9573 ctgacaagaaatctatcgaaactgctgaaaaggctggtaacggtggtgtcaaagctgaat 9514
Query: 549 aatcgggacgcgcatcgttgcgttttccaatcatgtgttttcttcatccatctctcacca 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9513 aatcgggacgcgcatcgttgcgttttccaatcatgtgttttcttcatccatctctcacca 9454
Query: 609 ttctcttataaataaacacgtatatatgtatataaatgtacatgcgtgtatgtatacaac 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9453 ttctcttataaataaacacgtatatatgtatataaatgtacatgcgtgtatgtatacaac 9394
Query: 669 tattaagatacctcaataggatgttttatcgtagcttttgttcagtttctttcgtgttta 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9393 tattaagatacctcaataggatgttttatcgtagcttttgttcagtttctttcgtgttta 9334
Query: 729 agtgttaaattgtacacatagacttcgcactttatttgaaagaaacgtgaatattattct 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9333 agtgttaaattgtacacatagacttcgcactttatttgaaagaaacgtgaatattattct 9274
Query: 789 ataaagatcagacccaacccttaactgttactgatcgagccgaccagatcaatatcctcc 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9273 ataaagatcagacccaacccttaactgttactgatcgagccgaccagatcaatatcctcc 9214
Query: 849 aagcaaaatggatgtcagtgatgtaaaaatattgatccttggtgccggtggtcttggatg 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9213 aagcaaaatggatgtcagtgatgtaaaaatattgatccttggtgccggtggtcttggatg 9154
Query: 909 tgagattgtcaagacattggcgctgtacggtttgccagaattacatattgtcgatatgga 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9153 tgagattgtcaagacattggcgctgtacggtttgccagaattacatattgtcgatatgga 9094
Query: 969 ta-catcgaattgacc 983
|| |||||||||||||
Sbjct: 9093 taccatcgaattgacc 9078
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6446
Number of Sequences: 1807
Number of extensions: 6446
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 983
length of database: 10,358,551
effective HSP length: 16
effective length of query: 967
effective length of database: 10,329,639
effective search space: 9988760913
effective search space used: 9988760913
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)